**ontoref** is a protocol specification and tooling layer for structured self-knowledge in
software projects. It provides schemas, Nushell automation, and Rust crates so that projects
can describe what they are, record architectural decisions, track operational state, and
execute formalized procedures — all as typed, queryable artifacts.
---
## Axioms
| Axiom | Meaning |
| --- | --- |
| **Protocol, Not Runtime** | Never a runtime dependency. Projects adopt the protocol; ontoref provides the schemas and modules to do so. |
| **Self-Describing** | Consumes its own protocol: `.ontology/`, `adrs/`, `reflection/` in this repo ARE ontoref running against itself. |
| **No Enforcement** | ontoref defines contracts. There is no enforcement mechanism. Coherence is voluntary and emerges from justified adoption. |
| **DAG-Formalized Knowledge** | Concepts, tensions, decisions, state — encoded as DAGs. Enables transversal queries and impact analysis. |
## Layers
```text
ontology/ Protocol specification — Nickel schemas for nodes, edges, ADRs, state, gates
adrs/ Architecture Decision Records — typed NCL with constraints and ontology checks
reflection/ Operational tooling — Nushell modules, DAG modes, forms, and schemas
crates/ Rust implementation — typed struct loaders and mode executors
.ontology/ Self-description — ontoref's own ontology, state, gate, and manifest
```
## Crates
| Crate | Purpose |
| --- | --- |
| `ontoref-ontology` | Load `.ontology/*.ncl` as typed Rust structs. Zero stratumiops deps — minimal adoption surface. |
| `ontoref-reflection` | Load, validate, and execute Reflection modes as NCL DAG contracts against project state. |
| `ontoref-daemon` | NCL export cache, file watcher, actor registry, HTTP API, MCP server, Q&A store, quick-actions, passive drift observation. |
`ontoref-daemon` caches `nickel export` results (keyed by path + mtime), reducing full sync
scans from ~2m42s to <30s. The daemon is always optional — every module falls back to direct
subprocess when unavailable.
### Daemon Capabilities
**Q&A Knowledge Store** — accumulated Q&A entries persist to `reflection/qa.ncl` (typed NCL,
git-versioned). Not localStorage. Any actor — developer, agent, CI — reads the same store.
**MCP Server** — exposes 8+ tools over stdio and streamable-HTTP for AI agent integration:
| Tool | What it does |
| --- | --- |
| `ontoref_qa_list` | List Q&A entries with optional filter |
| `ontoref_qa_add` | Append a new Q&A entry to `reflection/qa.ncl` |
| `ontoref_action_list` | List all quick actions from `.ontoref/config.ncl` |
| `ontoref_action_add` | Create a reflection mode + register it as a quick action |
| `ontoref_backlog_list` | List backlog items |
| `ontoref_backlog_add` | Add a backlog item |
| `ontoref_describe` | Describe project ontology and constraints |
| `ontoref_sync_scan` | Scan for ontology drift |
**Passive Drift Observation** — background file watcher that detects divergence between Yang
code artifacts and Yin ontology. Watches `crates/`, `.ontology/`, `adrs/`, `reflection/modes/`.
After a 15s debounce runs `sync scan + sync diff`; emits an `ontology_drift` notification when
MISSING/STALE/DRIFT/BROKEN items are found. Never applies changes — `apply` is always deliberate.
**Quick Actions** — runnable shortcuts over reflection modes, configured as `quick_actions` in
`.ontoref/config.ncl`. Accessible from HTTP (`/actions`), CLI (`./ontoref`), and MCP
(`ontoref_action_list/add`).
## Adopting ontoref
A consumer project needs exactly two artifacts:
```sh
# 1. Copy the entry point wrapper
cp templates/scripts-ontoref scripts/ontoref
chmod +x scripts/ontoref
# 2. Initialize config
mkdir -p .ontoref
cp templates/ontoref-config.ncl .ontoref/config.ncl
```
Or run the adoption mode interactively:
```sh
./ontoref --actor developer adopt_ontoref
```
`ONTOREF_PROJECT_ROOT` is set by the consumer wrapper — one ontoref checkout serves multiple projects.
## Prerequisites
- [Nushell](https://www.nushell.sh/) >= 0.110.0
- [Nickel](https://nickel-lang.org/) (for schema evaluation)
- Rust toolchain (for building crates)
- [Just](https://just.systems/) (for CI recipes)
To build `ontoref-daemon` and `ontoref-reflection` with NATS/SurrealDB support, the
stratumiops repo must be checked out at `../../../stratumiops`. Without it, build without
default features:
```sh
cargo build -p ontoref-daemon --no-default-features
cargo build -p ontoref-ontology # always standalone
```
## Development
```sh
cargo check-all # check all targets + features
cargo test-all # run full test suite
just ci-lint # clippy + TOML + Nickel + Markdown
just ci-full # all CI checks
nu --ide-check 50 reflection/modules/.nu # validate a Nushell module
./ontoref --actor developer # run a reflection mode
```
## License
MIT OR Apache-2.0