ontoref/README.md
Jesús Pérez 77373f5859 init repo
2026-03-12 23:59:21 +00:00

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ontoref


ontoref is a protocol specification and tooling layer for structured self-knowledge in software projects. It provides schemas, Nushell automation, and Rust crates so that projects can describe what they are, record architectural decisions, track operational state, and execute formalized procedures — all as typed, queryable artifacts.


Axioms

Axiom Meaning
Protocol, Not Runtime Never a runtime dependency. Projects adopt the protocol; ontoref provides the schemas and modules to do so.
Self-Describing Consumes its own protocol: .ontology/, adrs/, reflection/ in this repo ARE ontoref running against itself.
No Enforcement ontoref defines contracts. There is no enforcement mechanism. Coherence is voluntary and emerges from justified adoption.
DAG-Formalized Knowledge Concepts, tensions, decisions, state — encoded as DAGs. Enables transversal queries and impact analysis.

Layers

ontology/          Protocol specification — Nickel schemas for nodes, edges, ADRs, state, gates
adrs/              Architecture Decision Records — typed NCL with constraints and ontology checks
reflection/        Operational tooling — Nushell modules, DAG modes, forms, and schemas
crates/            Rust implementation — typed struct loaders and mode executors
.ontology/         Self-description — ontoref's own ontology, state, gate, and manifest

Crates

Crate Purpose
ontoref-ontology Load .ontology/*.ncl as typed Rust structs. Zero stratumiops deps — minimal adoption surface.
ontoref-reflection Load, validate, and execute Reflection modes as NCL DAG contracts against project state.
ontoref-daemon NCL export cache, file watcher, actor registry, HTTP API, MCP server, Q&A store, quick-actions, passive drift observation.

ontoref-daemon caches nickel export results (keyed by path + mtime), reducing full sync scans from ~2m42s to <30s. The daemon is always optional — every module falls back to direct subprocess when unavailable.

Daemon Capabilities

Q&A Knowledge Store — accumulated Q&A entries persist to reflection/qa.ncl (typed NCL, git-versioned). Not localStorage. Any actor — developer, agent, CI — reads the same store.

MCP Server — exposes 8+ tools over stdio and streamable-HTTP for AI agent integration:

Tool What it does
ontoref_qa_list List Q&A entries with optional filter
ontoref_qa_add Append a new Q&A entry to reflection/qa.ncl
ontoref_action_list List all quick actions from .ontoref/config.ncl
ontoref_action_add Create a reflection mode + register it as a quick action
ontoref_backlog_list List backlog items
ontoref_backlog_add Add a backlog item
ontoref_describe Describe project ontology and constraints
ontoref_sync_scan Scan for ontology drift

Passive Drift Observation — background file watcher that detects divergence between Yang code artifacts and Yin ontology. Watches crates/, .ontology/, adrs/, reflection/modes/. After a 15s debounce runs sync scan + sync diff; emits an ontology_drift notification when MISSING/STALE/DRIFT/BROKEN items are found. Never applies changes — apply is always deliberate.

Quick Actions — runnable shortcuts over reflection modes, configured as quick_actions in .ontoref/config.ncl. Accessible from HTTP (/actions), CLI (./ontoref), and MCP (ontoref_action_list/add).

Adopting ontoref

A consumer project needs exactly two artifacts:

# 1. Copy the entry point wrapper
cp templates/scripts-ontoref scripts/ontoref
chmod +x scripts/ontoref

# 2. Initialize config
mkdir -p .ontoref
cp templates/ontoref-config.ncl .ontoref/config.ncl

Or run the adoption mode interactively:

./ontoref --actor developer adopt_ontoref

ONTOREF_PROJECT_ROOT is set by the consumer wrapper — one ontoref checkout serves multiple projects.

Prerequisites

  • Nushell >= 0.110.0
  • Nickel (for schema evaluation)
  • Rust toolchain (for building crates)
  • Just (for CI recipes)

To build ontoref-daemon and ontoref-reflection with NATS/SurrealDB support, the stratumiops repo must be checked out at ../../../stratumiops. Without it, build without default features:

cargo build -p ontoref-daemon --no-default-features
cargo build -p ontoref-ontology   # always standalone

Development

cargo check-all                              # check all targets + features
cargo test-all                               # run full test suite
just ci-lint                                 # clippy + TOML + Nickel + Markdown
just ci-full                                 # all CI checks
nu --ide-check 50 reflection/modules/<file>.nu  # validate a Nushell module
./ontoref --actor developer <mode>           # run a reflection mode

License

MIT OR Apache-2.0